Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 AC006449.6-201ENST00000612330 2296 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 AL603832.2-201ENST00000566195 2125 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.55□□□□□ -0.4
VGLL1Q99990 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 KRT16P4-201ENST00000453883 522 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.55□□□□□ -0.4
VGLL1Q99990 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.55□□□□□ -0.4
VGLL1Q99990 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 MPDU1-223ENST00000582151 728 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 NKAPP1-205ENST00000585790 367 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 AC069148.1-201ENST00000608741 768 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 AC091076.1-201ENST00000610741 619 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.55□□□□□ -0.4
VGLL1Q99990 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 AL022326.1-202ENST00000641533 845 ntBASIC12.55□□□□□ -0.4
VGLL1Q99990 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VGLL1Q99990 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.55□□□□□ -0.4
VGLL1Q99990 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VGLL1Q99990 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VGLL1Q99990 KRT8P39-201ENST00000396270 1433 ntBASIC12.54□□□□□ -0.4
VGLL1Q99990 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
VGLL1Q99990 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VGLL1Q99990 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.54□□□□□ -0.4
VGLL1Q99990 MIR4492-201ENST00000581627 80 ntBASIC12.54□□□□□ -0.4
VGLL1Q99990 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.54□□□□□ -0.4
VGLL1Q99990 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 AL139424.1-201ENST00000607572 797 ntBASIC12.54□□□□□ -0.4
VGLL1Q99990 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VGLL1Q99990 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VGLL1Q99990 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms