Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL13Q99616 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 MIR1233-2-201ENST00000408138 82 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 MIR1233-1-201ENST00000408722 82 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL13Q99616 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 SPDYE11-202ENST00000450699 704 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 SPDYE9P-201ENST00000570642 692 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 AC026120.1-201ENST00000611536 926 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 SPDYE10P-202ENST00000612005 668 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 SPDYE8P-202ENST00000612377 668 ntBASIC13.8□□□□□ -0.2
CCL13Q99616 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL13Q99616 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL13Q99616 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL13Q99616 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 AC211486.1-202ENST00000416371 468 ntBASIC13.79□□□□□ -0.2
CCL13Q99616 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.79□□□□□ -0.2
CCL13Q99616 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 AC211476.1-201ENST00000503899 468 ntBASIC13.79□□□□□ -0.2
CCL13Q99616 YBX1P5-201ENST00000509441 847 ntBASIC13.79□□□□□ -0.2
CCL13Q99616 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL13Q99616 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL13Q99616 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL13Q99616 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.79□□□□□ -0.2
CCL13Q99616 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL13Q99616 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 AC055717.3-201ENST00000622967 595 ntBASIC13.79□□□□□ -0.2
CCL13Q99616 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 AKAP8P1-201ENST00000434743 1349 ntBASIC13.79□□□□□ -0.2
CCL13Q99616 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL13Q99616 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL13Q99616 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL13Q99616 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 LINC01144-201ENST00000626198 1710 ntBASIC13.78□□□□□ -0.2
CCL13Q99616 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms