Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MS4A4EQ96PG1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 KRT18P34-201ENST00000488218 1270 ntBASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PDPK2P-202ENST00000562415 1191 ntBASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 AC106730.1-201ENST00000566722 1090 ntBASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MS4A4EQ96PG1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC140113.2-201ENST00000604370 208 ntBASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AL078644.1-201ENST00000609881 752 ntBASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 FAM197Y3-203ENST00000618346 717 ntBASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 AC005622.1-201ENST00000636801 1703 ntBASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MS4A4EQ96PG1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms