Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AC068472.1-201ENST00000474589 881 ntBASIC12.53□□□□□ -0.4
AP1S3Q96PC3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AC109462.3-201ENST00000573934 613 ntBASIC12.53□□□□□ -0.4
AP1S3Q96PC3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 LINC01568-207ENST00000641790 1380 ntBASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
AP1S3Q96PC3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 AC010460.3-201ENST00000511359 1579 ntBASIC12.52□□□□□ -0.4
AP1S3Q96PC3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP1S3Q96PC3 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.52□□□□□ -0.4
AP1S3Q96PC3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP1S3Q96PC3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms