Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 INTS4P1-201ENST00000438455 1935 ntBASIC14.2□□□□□ -0.14
CMTM3Q96MX0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 TSPY22P-201ENST00000427496 604 ntBASIC14.2□□□□□ -0.14
CMTM3Q96MX0 TSPY15P-201ENST00000457163 923 ntBASIC14.2□□□□□ -0.14
CMTM3Q96MX0 AL353135.1-201ENST00000606729 504 ntBASIC14.2□□□□□ -0.14
CMTM3Q96MX0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 AC131009.4-201ENST00000624048 1740 ntBASIC14.2□□□□□ -0.14
CMTM3Q96MX0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 GRK6P1-201ENST00000400595 1711 ntBASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 AC073592.4-201ENST00000623827 446 ntBASIC14.19□□□□□ -0.14
CMTM3Q96MX0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.19□□□□□ -0.14
CMTM3Q96MX0 TP73-AS1-210ENST00000637775 1455 ntBASIC14.18□□□□□ -0.14
CMTM3Q96MX0 AC068587.6-202ENST00000641839 5619 ntBASIC14.18□□□□□ -0.14
CMTM3Q96MX0 NORAD-201ENST00000565493 5339 ntBASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMTM3Q96MX0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms