Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ITCHQ96J02 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.74■□□□□ 0.11
ITCHQ96J02 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.74■□□□□ 0.11
ITCHQ96J02 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.74■□□□□ 0.11
ITCHQ96J02 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.74■□□□□ 0.11
ITCHQ96J02 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.74■□□□□ 0.11
ITCHQ96J02 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ITCHQ96J02 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 AC006504.4-201ENST00000592118 1568 ntBASIC15.74■□□□□ 0.11
ITCHQ96J02 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITCHQ96J02 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.73■□□□□ 0.11
ITCHQ96J02 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 AC010491.1-201ENST00000563101 2797 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.73■□□□□ 0.11
ITCHQ96J02 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 HCG4-201ENST00000418983 998 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 KRT18P31-201ENST00000506277 1292 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 KRT18P35-201ENST00000510488 1269 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.73■□□□□ 0.11
ITCHQ96J02 AC107918.2-201ENST00000530817 355 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.73■□□□□ 0.11
ITCHQ96J02 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 GGTLC5P-201ENST00000617623 998 ntBASIC15.73■□□□□ 0.11
ITCHQ96J02 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.73■□□□□ 0.11
ITCHQ96J02 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ITCHQ96J02 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ITCHQ96J02 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
ITCHQ96J02 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITCHQ96J02 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.72■□□□□ 0.11
ITCHQ96J02 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 AC129492.6-201ENST00000611383 1305 ntBASIC15.72■□□□□ 0.11
ITCHQ96J02 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.72■□□□□ 0.11
ITCHQ96J02 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 LAGE3P1-201ENST00000425356 484 ntBASIC15.72■□□□□ 0.11
ITCHQ96J02 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ITCHQ96J02 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
ITCHQ96J02 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ITCHQ96J02 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms