Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC007950.2-201ENST00000615045 2347 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC112504.1-201ENST00000623415 1841 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 CDC14C-201ENST00000428251 1719 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC069224.1-201ENST00000566372 1715 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC120114.3-201ENST00000611923 658 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 AC092865.6-201ENST00000642101 219 ntBASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM5Q96HC4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 MED15P5-201ENST00000423150 992 ntBASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AC245100.5-201ENST00000452108 331 ntBASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AC002347.1-201ENST00000569543 541 ntBASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM5Q96HC4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 AL589702.1-201ENST00000641229 1509 ntBASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms