Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC023141.13-201ENST00000604991 943 ntBASIC17.43■□□□□ 0.38
TRIM11Q96F44 Z83851.2-201ENST00000609564 659 ntBASIC17.43■□□□□ 0.38
TRIM11Q96F44 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM11Q96F44 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM11Q96F44 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.42■□□□□ 0.38
TRIM11Q96F44 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 AL603832.2-201ENST00000566195 2125 ntBASIC17.42■□□□□ 0.38
TRIM11Q96F44 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM11Q96F44 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM11Q96F44 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 AL009183.1-201ENST00000603760 355 ntBASIC17.41■□□□□ 0.38
TRIM11Q96F44 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM11Q96F44 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms