Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS33AQ96AX1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 PCGF3-213ENST00000620529 1899 ntBASIC15.88■□□□□ 0.13
VPS33AQ96AX1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AC131009.4-201ENST00000624048 1740 ntBASIC15.88■□□□□ 0.13
VPS33AQ96AX1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 GPAA1P2-202ENST00000606848 1787 ntBASIC15.88■□□□□ 0.13
VPS33AQ96AX1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ATP5G2P1-201ENST00000433580 426 ntBASIC15.88■□□□□ 0.13
VPS33AQ96AX1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AL589182.2-201ENST00000619332 1049 ntBASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS33AQ96AX1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 SLC22A20-204ENST00000530038 1673 ntBASIC15.87■□□□□ 0.13
VPS33AQ96AX1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AP002414.2-201ENST00000591780 3365 ntBASIC15.87■□□□□ 0.13
VPS33AQ96AX1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AC104640.1-201ENST00000562617 2109 ntBASIC15.87■□□□□ 0.13
VPS33AQ96AX1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.87■□□□□ 0.13
VPS33AQ96AX1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AL139288.1-201ENST00000623748 933 ntBASIC15.87■□□□□ 0.13
VPS33AQ96AX1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS33AQ96AX1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS33AQ96AX1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms