Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 AC093724.1-201ENST00000448659 1027 ntBASIC14.12□□□□□ -0.15
USP9XQ93008 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.12□□□□□ -0.15
USP9XQ93008 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.12□□□□□ -0.15
USP9XQ93008 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
USP9XQ93008 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.12□□□□□ -0.15
USP9XQ93008 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.12□□□□□ -0.15
USP9XQ93008 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 AC133963.1-201ENST00000504166 1679 ntBASIC14.12□□□□□ -0.15
USP9XQ93008 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
USP9XQ93008 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
USP9XQ93008 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.12□□□□□ -0.15
USP9XQ93008 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.12□□□□□ -0.15
USP9XQ93008 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 AC020914.3-201ENST00000594712 304 ntBASIC14.12□□□□□ -0.15
USP9XQ93008 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 Z97205.2-201ENST00000564697 1639 ntBASIC14.11□□□□□ -0.15
USP9XQ93008 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
USP9XQ93008 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 AC093525.9-201ENST00000624961 1746 ntBASIC14.11□□□□□ -0.15
USP9XQ93008 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
USP9XQ93008 SOCS2P1-201ENST00000417727 557 ntBASIC14.11□□□□□ -0.15
USP9XQ93008 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.11□□□□□ -0.15
USP9XQ93008 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.11□□□□□ -0.15
USP9XQ93008 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
USP9XQ93008 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
USP9XQ93008 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.11□□□□□ -0.15
USP9XQ93008 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.11□□□□□ -0.15
USP9XQ93008 AP006547.1-201ENST00000563435 692 ntBASIC14.11□□□□□ -0.15
USP9XQ93008 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.11□□□□□ -0.15
USP9XQ93008 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USP9XQ93008 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
USP9XQ93008 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 SNX33P1-201ENST00000592116 1762 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.1□□□□□ -0.15
USP9XQ93008 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC093433.1-201ENST00000458048 571 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.1□□□□□ -0.15
USP9XQ93008 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC005252.2-201ENST00000624630 1141 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.1□□□□□ -0.15
USP9XQ93008 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms