Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 AC064862.7-201ENST00000604520 867 ntBASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 KRT8P49-201ENST00000604166 1432 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC010491.1-201ENST00000563101 2797 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC013467.2-201ENST00000605472 835 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AL353135.1-201ENST00000606729 504 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC006277.1-201ENST00000624348 1610 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC002310.6-201ENST00000624451 1377 ntBASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RTN4IP1Q8WWV3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms