Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 LINC01144-201ENST00000626198 1710 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AC026691.1-201ENST00000602502 2017 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AL391005.1-201ENST00000623953 2435 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 VN2R19P-201ENST00000442399 1052 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AL513480.1-201ENST00000451731 511 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 UNC93B6-202ENST00000528242 690 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AC020765.3-201ENST00000613051 740 ntBASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF3IP1Q8TDR0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 MIR600HG-201ENST00000449175 5984 ntBASIC17.21■□□□□ 0.34
TRAF3IP1Q8TDR0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 MTHFR-217ENST00000641820 1569 ntBASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF3IP1Q8TDR0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF3IP1Q8TDR0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms