Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC016694.1-201ENST00000434179 700 ntBASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 C1QBPP1-201ENST00000400117 770 ntBASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AC134312.5-201ENST00000568031 1313 ntBASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 EIF4HP1-201ENST00000453115 687 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC026410.3-201ENST00000514280 936 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC000095.1-201ENST00000603208 874 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ECM1P1-201ENST00000604092 1279 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 RPL17P11-201ENST00000417593 544 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 U62317.3-201ENST00000608319 855 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 AP003419.4-201ENST00000616071 517 ntBASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ALMS1Q8TCU4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms