Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCC2Q8TAQ2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 AC024909.3-201ENST00000611513 2257 ntBASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 AC002056.1-201ENST00000395613 760 ntBASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ACTG1P14-201ENST00000446382 1122 ntBASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 AC092902.6-201ENST00000641783 218 ntBASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCC2Q8TAQ2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCC2Q8TAQ2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms