Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 RN7SL589P-201ENST00000481268 310 ntBASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 YBX1P5-201ENST00000509441 847 ntBASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 KRT8P48-201ENST00000515599 1220 ntBASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
LPCAT1Q8NF37 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 PCDH8P1-201ENST00000428983 2773 ntBASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 MIR1233-2-201ENST00000408138 82 ntBASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 MIR1233-1-201ENST00000408722 82 ntBASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.6■□□□□ 0.25
LPCAT1Q8NF37 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms