Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 RNU1-129P-201ENST00000384064 167 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 HMGA1P7-201ENST00000406908 502 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 PMS2P4-201ENST00000412466 1052 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 U1.21-201ENST00000580816 167 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSMEM1Q8N8F7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 CICP4-201ENST00000447359 2812 ntBASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 CICP14-201ENST00000629111 2732 ntBASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 CRYGEP-201ENST00000412192 528 ntBASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LSMEM1Q8N8F7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 IGLL3P-201ENST00000412472 434 ntBASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 TPM4P1-201ENST00000436100 807 ntBASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms