Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNYL1Q8N7R7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNYL1Q8N7R7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SLC22A20-204ENST00000530038 1673 ntBASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 AC008608.2-201ENST00000606089 416 ntBASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNYL1Q8N7R7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNYL1Q8N7R7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CCNYL1Q8N7R7 AC006504.4-201ENST00000592118 1568 ntBASIC16.3■□□□□ 0.2
CCNYL1Q8N7R7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNYL1Q8N7R7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms