Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AC211486.1-202ENST00000416371 468 ntBASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 ADH5P3-201ENST00000433842 1137 ntBASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AC211476.1-201ENST00000503899 468 ntBASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 YBX1P5-201ENST00000509441 847 ntBASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AC243562.1-201ENST00000560672 389 ntBASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC82Q8N4S0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 MIR1233-2-201ENST00000408138 82 ntBASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 MIR1233-1-201ENST00000408722 82 ntBASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 KRT18P34-201ENST00000488218 1270 ntBASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AC026120.1-201ENST00000611536 926 ntBASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AC134684.3-201ENST00000641758 218 ntBASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC82Q8N4S0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 SPDYE11-202ENST00000450699 704 ntBASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC82Q8N4S0 SPDYE9P-201ENST00000570642 692 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms