Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.03■□□□□ 0.32
SCML4Q8N228 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.03■□□□□ 0.32
SCML4Q8N228 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.03■□□□□ 0.32
SCML4Q8N228 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 MIR6080-201ENST00000617359 66 ntBASIC17.03■□□□□ 0.32
SCML4Q8N228 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SCML4Q8N228 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.03■□□□□ 0.32
SCML4Q8N228 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.03■□□□□ 0.32
SCML4Q8N228 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SCML4Q8N228 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.03■□□□□ 0.32
SCML4Q8N228 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCML4Q8N228 AC006449.6-201ENST00000612330 2296 ntBASIC17.03■□□□□ 0.32
SCML4Q8N228 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.02■□□□□ 0.32
SCML4Q8N228 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 TUBB3P1-201ENST00000405796 1332 ntBASIC17.02■□□□□ 0.32
SCML4Q8N228 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SCML4Q8N228 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCML4Q8N228 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SCML4Q8N228 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCML4Q8N228 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.02■□□□□ 0.32
SCML4Q8N228 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCML4Q8N228 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
SCML4Q8N228 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.02■□□□□ 0.32
SCML4Q8N228 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 RFPL4AP1-201ENST00000530883 850 ntBASIC17.02■□□□□ 0.32
SCML4Q8N228 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCML4Q8N228 BANF1P1-201ENST00000553684 263 ntBASIC17.02■□□□□ 0.32
SCML4Q8N228 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.02■□□□□ 0.32
SCML4Q8N228 MIR4453-201ENST00000584019 89 ntBASIC17.02■□□□□ 0.32
SCML4Q8N228 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.02■□□□□ 0.32
SCML4Q8N228 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
SCML4Q8N228 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.02■□□□□ 0.31
SCML4Q8N228 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCML4Q8N228 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.02■□□□□ 0.31
SCML4Q8N228 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.02■□□□□ 0.31
SCML4Q8N228 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.02■□□□□ 0.31
SCML4Q8N228 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCML4Q8N228 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SCML4Q8N228 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML4Q8N228 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML4Q8N228 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML4Q8N228 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCML4Q8N228 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.01■□□□□ 0.31
SCML4Q8N228 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.01■□□□□ 0.31
SCML4Q8N228 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.01■□□□□ 0.31
SCML4Q8N228 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.01■□□□□ 0.31
SCML4Q8N228 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.01■□□□□ 0.31
SCML4Q8N228 AC140878.1-201ENST00000565277 250 ntBASIC17.01■□□□□ 0.31
SCML4Q8N228 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 AC026979.3-201ENST00000607315 403 ntBASIC17.01■□□□□ 0.31
SCML4Q8N228 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML4Q8N228 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SCML4Q8N228 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML4Q8N228 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML4Q8N228 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms