Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 AC105021.1-202ENST00000570572 669 ntBASIC18.31■□□□□ 0.52
TRIM50Q86XT4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.31■□□□□ 0.52
TRIM50Q86XT4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM50Q86XT4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC078925.2-201ENST00000624013 1973 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 RPL37AP1-201ENST00000412502 279 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 RN7SL828P-201ENST00000607615 303 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 TEX28P1-201ENST00000613479 1221 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 TEX28P2-201ENST00000617764 1221 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AF228730.6-201ENST00000641497 218 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC084121.3-201ENST00000641716 218 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC105233.6-201ENST00000642093 218 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM50Q86XT4 AC020916.1-201ENST00000587762 1774 ntBASIC18.3■□□□□ 0.52
TRIM50Q86XT4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AL589739.1-201ENST00000607720 493 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AL133215.2-201ENST00000609242 977 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AC006538.1-201ENST00000567905 1585 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AC022144.1-201ENST00000602255 1580 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 AL035456.1-201ENST00000456064 1369 ntBASIC18.29■□□□□ 0.52
TRIM50Q86XT4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM50Q86XT4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms