Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 PTP4A1P2-201ENST00000546033 454 ntBASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AL365330.1-201ENST00000607459 531 ntBASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT28Q7Z3Y7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 PFN1P12-201ENST00000455938 534 ntBASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 ENPP7P5-201ENST00000541031 1031 ntBASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT28Q7Z3Y7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 MIR1247-201ENST00000408206 136 ntBASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC074338.1-201ENST00000416825 156 ntBASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT28Q7Z3Y7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms