Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AC004870.1-201ENST00000315132 882 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 MRPL20P1-201ENST00000400819 433 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AC108073.2-201ENST00000464002 357 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AC005412.3-201ENST00000580309 715 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AL049840.3-201ENST00000602669 611 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AL031008.1-201ENST00000619963 541 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 FAM215A-202ENST00000632077 792 ntBASIC16.07■□□□□ 0.16
SGO1Q5FBB7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SGO1Q5FBB7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 AC117500.6-201ENST00000624871 588 ntBASIC16.06■□□□□ 0.16
SGO1Q5FBB7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SGO1Q5FBB7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.05■□□□□ 0.16
SGO1Q5FBB7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms