Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 AC018665.1-201ENST00000622927 1362 ntBASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SPHKAPQ2M3C7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 TOMM22P5-201ENST00000416399 439 ntBASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 SLED1-202ENST00000512051 380 ntBASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AC092552.1-201ENST00000547243 906 ntBASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SPHKAPQ2M3C7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 AC009053.2-201ENST00000563701 2365 ntBASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SPHKAPQ2M3C7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
SPHKAPQ2M3C7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
SPHKAPQ2M3C7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 AL512343.1-201ENST00000605837 169 ntBASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 Six3os1_5.1-201ENST00000611000 271 ntBASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHKAPQ2M3C7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AC136604.1-201ENST00000418535 575 ntBASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AP001282.1-201ENST00000531301 1499 ntBASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms