Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 FRMD8P1-201ENST00000440433 1524 ntBASIC15.33■□□□□ 0.04
RUNX1T1Q06455 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RUNX1T1Q06455 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 AC004870.1-201ENST00000315132 882 ntBASIC15.32■□□□□ 0.04
RUNX1T1Q06455 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 AC124947.2-201ENST00000547118 1133 ntBASIC15.32■□□□□ 0.04
RUNX1T1Q06455 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 MYO15B-237ENST00000642007 4893 ntBASIC15.32■□□□□ 0.04
RUNX1T1Q06455 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 GPR89P-201ENST00000407924 1495 ntBASIC15.32■□□□□ 0.04
RUNX1T1Q06455 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RUNX1T1Q06455 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 LINC00982-205ENST00000420957 435 ntBASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PRELID1P1-202ENST00000567272 903 ntBASIC15.31■□□□□ 0.04
RUNX1T1Q06455 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AL121772.3-201ENST00000610840 674 ntBASIC15.31■□□□□ 0.04
RUNX1T1Q06455 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.31■□□□□ 0.04
RUNX1T1Q06455 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms