Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-1P78426 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-1P78426 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-1P78426 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 AC002056.1-201ENST00000395613 760 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 AL627223.1-201ENST00000416693 442 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 BASP1P1-201ENST00000430708 665 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.56□□□□□ -0.08
NKX6-1P78426 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX6-1P78426 AC091167.2-201ENST00000579581 588 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.56□□□□□ -0.08
NKX6-1P78426 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
NKX6-1P78426 AC026120.1-201ENST00000611536 926 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 AC009093.7-201ENST00000623853 1223 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-1P78426 AL645728.2-201ENST00000641974 660 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 AL021920.2-201ENST00000624828 1351 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 KRT8P49-201ENST00000604166 1432 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NKX6-1P78426 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 AL353732.1-201ENST00000569618 1459 ntBASIC14.56□□□□□ -0.08
NKX6-1P78426 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-1P78426 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-1P78426 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NKX6-1P78426 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-1P78426 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NKX6-1P78426 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC092919.2-201ENST00000623631 1645 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC103702.1-201ENST00000548801 2630 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 PCDH8P1-201ENST00000428983 2773 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 CNN2P2-201ENST00000443536 909 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.55□□□□□ -0.08
NKX6-1P78426 CNN2P3-201ENST00000450201 906 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms