Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 AL009183.1-201ENST00000603760 355 ntBASIC18.11■□□□□ 0.49
PMS1P54277 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.11■□□□□ 0.49
PMS1P54277 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PMS1P54277 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PMS1P54277 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.11■□□□□ 0.49
PMS1P54277 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PMS1P54277 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.11■□□□□ 0.49
PMS1P54277 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 LINC00554-201ENST00000564841 3011 ntBASIC18.11■□□□□ 0.49
PMS1P54277 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PMS1P54277 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PMS1P54277 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 AC025580.3-201ENST00000617932 1424 ntBASIC18.1■□□□□ 0.49
PMS1P54277 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PMS1P54277 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.1■□□□□ 0.49
PMS1P54277 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.1■□□□□ 0.49
PMS1P54277 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.1■□□□□ 0.49
PMS1P54277 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.1■□□□□ 0.49
PMS1P54277 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.1■□□□□ 0.49
PMS1P54277 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.1■□□□□ 0.49
PMS1P54277 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.1■□□□□ 0.49
PMS1P54277 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 AC064836.3-201ENST00000607928 673 ntBASIC18.1■□□□□ 0.49
PMS1P54277 AC004877.2-201ENST00000623941 599 ntBASIC18.1■□□□□ 0.49
PMS1P54277 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PMS1P54277 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PMS1P54277 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PMS1P54277 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 AC069224.1-201ENST00000566372 1715 ntBASIC18.09■□□□□ 0.49
PMS1P54277 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PMS1P54277 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.09■□□□□ 0.49
PMS1P54277 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PMS1P54277 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PMS1P54277 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.09■□□□□ 0.49
PMS1P54277 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 AC007967.2-201ENST00000432613 625 ntBASIC18.09■□□□□ 0.49
PMS1P54277 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.09■□□□□ 0.49
PMS1P54277 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms