Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NF2-208ENST00000403435 2568 ntTSL 5 BASIC23.16■■□□□ 1.3
CLTCL1P53675 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.16■■□□□ 1.3
CLTCL1P53675 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CLTCL1P53675 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLTCL1P53675 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AC243562.2-201ENST00000561247 970 ntBASIC23.15■■□□□ 1.3
CLTCL1P53675 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 AC005052.1-201ENST00000625181 2492 ntBASIC23.15■■□□□ 1.3
CLTCL1P53675 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC23.15■■□□□ 1.3
CLTCL1P53675 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.15■■□□□ 1.3
CLTCL1P53675 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC23.15■■□□□ 1.3
CLTCL1P53675 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC23.15■■□□□ 1.3
CLTCL1P53675 AL512343.1-201ENST00000605837 169 ntBASIC23.15■■□□□ 1.3
CLTCL1P53675 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLTCL1P53675 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC23.14■■□□□ 1.3
CLTCL1P53675 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CLTCL1P53675 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC23.14■■□□□ 1.3
CLTCL1P53675 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLTCL1P53675 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.14■■□□□ 1.3
CLTCL1P53675 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.14■■□□□ 1.3
CLTCL1P53675 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CLTCL1P53675 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 RPS2P32-201ENST00000439199 892 ntBASIC23.14■■□□□ 1.29
CLTCL1P53675 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.14■■□□□ 1.29
CLTCL1P53675 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AC092552.1-201ENST00000547243 906 ntBASIC23.14■■□□□ 1.29
CLTCL1P53675 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.14■■□□□ 1.29
CLTCL1P53675 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC23.14■■□□□ 1.29
CLTCL1P53675 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.14■■□□□ 1.29
CLTCL1P53675 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.14■■□□□ 1.29
CLTCL1P53675 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.14■■□□□ 1.29
CLTCL1P53675 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLTCL1P53675 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
CLTCL1P53675 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CLTCL1P53675 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC23.13■■□□□ 1.29
CLTCL1P53675 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.13■■□□□ 1.29
CLTCL1P53675 AC022210.1-201ENST00000449856 793 ntBASIC23.13■■□□□ 1.29
CLTCL1P53675 CROCCP4-201ENST00000457096 498 ntBASIC23.13■■□□□ 1.29
CLTCL1P53675 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC23.13■■□□□ 1.29
CLTCL1P53675 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC23.13■■□□□ 1.29
CLTCL1P53675 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CLTCL1P53675 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC23.13■■□□□ 1.29
CLTCL1P53675 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC23.13■■□□□ 1.29
CLTCL1P53675 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC23.13■■□□□ 1.29
CLTCL1P53675 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLTCL1P53675 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CLTCL1P53675 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.12■■□□□ 1.29
CLTCL1P53675 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 AL442647.2-201ENST00000429864 857 ntBASIC23.12■■□□□ 1.29
CLTCL1P53675 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC23.12■■□□□ 1.29
CLTCL1P53675 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLTCL1P53675 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms