Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
LBX1P52954 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.24■□□□□ 0.51
LBX1P52954 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 RPSAP31-201ENST00000416648 895 ntBASIC18.24■□□□□ 0.51
LBX1P52954 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.24■□□□□ 0.51
LBX1P52954 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.24■□□□□ 0.51
LBX1P52954 SERPINA13P-202ENST00000478994 924 ntBASIC18.24■□□□□ 0.51
LBX1P52954 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LBX1P52954 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
LBX1P52954 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
LBX1P52954 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.24■□□□□ 0.51
LBX1P52954 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LBX1P52954 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
LBX1P52954 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 FRMD8P1-201ENST00000440433 1524 ntBASIC18.23■□□□□ 0.51
LBX1P52954 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.23■□□□□ 0.51
LBX1P52954 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.23■□□□□ 0.51
LBX1P52954 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 NOC2LP1-201ENST00000450578 752 ntBASIC18.23■□□□□ 0.51
LBX1P52954 AL590640.2-201ENST00000457038 527 ntBASIC18.23■□□□□ 0.51
LBX1P52954 AC012618.1-201ENST00000461223 412 ntBASIC18.23■□□□□ 0.51
LBX1P52954 CTBP2P4-201ENST00000513884 920 ntBASIC18.23■□□□□ 0.51
LBX1P52954 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 AP003392.6-201ENST00000607709 325 ntBASIC18.23■□□□□ 0.51
LBX1P52954 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.23■□□□□ 0.51
LBX1P52954 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.23■□□□□ 0.51
LBX1P52954 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.23■□□□□ 0.51
LBX1P52954 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LBX1P52954 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LBX1P52954 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LBX1P52954 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LBX1P52954 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
LBX1P52954 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.22■□□□□ 0.51
LBX1P52954 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.22■□□□□ 0.51
LBX1P52954 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.22■□□□□ 0.51
LBX1P52954 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.22■□□□□ 0.51
LBX1P52954 AC132192.2-201ENST00000596206 1147 ntBASIC18.22■□□□□ 0.51
LBX1P52954 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 AF254983.2-201ENST00000612331 135 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms