Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.55■□□□□ 0.56
USP11P51784 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 METTL21AP1-201ENST00000438852 635 ntBASIC18.54■□□□□ 0.56
USP11P51784 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.54■□□□□ 0.56
USP11P51784 AC004449.1-201ENST00000564240 433 ntBASIC18.54■□□□□ 0.56
USP11P51784 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 AC015911.4-201ENST00000588022 1070 ntBASIC18.54■□□□□ 0.56
USP11P51784 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 AC018529.1-201ENST00000613063 361 ntBASIC18.54■□□□□ 0.56
USP11P51784 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
USP11P51784 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP11P51784 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP11P51784 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.54■□□□□ 0.56
USP11P51784 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.54■□□□□ 0.56
USP11P51784 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 PKD1P1-201ENST00000458669 6805 ntBASIC18.53■□□□□ 0.56
USP11P51784 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 SPDYE7P-202ENST00000420373 878 ntBASIC18.53■□□□□ 0.56
USP11P51784 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.53■□□□□ 0.56
USP11P51784 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.53■□□□□ 0.56
USP11P51784 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 RNA5SP410-201ENST00000516285 106 ntBASIC18.53■□□□□ 0.56
USP11P51784 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.53■□□□□ 0.56
USP11P51784 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.53■□□□□ 0.56
USP11P51784 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP11P51784 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
USP11P51784 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.53■□□□□ 0.56
USP11P51784 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.53■□□□□ 0.56
USP11P51784 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
USP11P51784 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP11P51784 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP11P51784 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.53■□□□□ 0.56
USP11P51784 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
USP11P51784 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP11P51784 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
USP11P51784 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.52■□□□□ 0.56
USP11P51784 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
USP11P51784 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.52■□□□□ 0.56
USP11P51784 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 MIR4321-201ENST00000592276 80 ntBASIC18.52■□□□□ 0.56
USP11P51784 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.52■□□□□ 0.56
USP11P51784 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP11P51784 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.52■□□□□ 0.55
USP11P51784 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP11P51784 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP11P51784 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
USP11P51784 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
USP11P51784 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms