Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.7□□□□□ -0.06
SRP9P49458 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SRP9P49458 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 AC004817.3-201ENST00000602957 2129 ntBASIC14.69□□□□□ -0.06
SRP9P49458 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.69□□□□□ -0.06
SRP9P49458 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.69□□□□□ -0.06
SRP9P49458 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SRP9P49458 AC010491.1-201ENST00000563101 2797 ntBASIC14.69□□□□□ -0.06
SRP9P49458 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.69□□□□□ -0.06
SRP9P49458 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
SRP9P49458 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SRP9P49458 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.69□□□□□ -0.06
SRP9P49458 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.69□□□□□ -0.06
SRP9P49458 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 OR7E14P-202ENST00000530490 1290 ntBASIC14.69□□□□□ -0.06
SRP9P49458 AP002469.2-201ENST00000531724 424 ntBASIC14.69□□□□□ -0.06
SRP9P49458 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.69□□□□□ -0.06
SRP9P49458 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
SRP9P49458 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.69□□□□□ -0.06
SRP9P49458 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.69□□□□□ -0.06
SRP9P49458 AC006557.2-201ENST00000592985 1240 ntBASIC14.69□□□□□ -0.06
SRP9P49458 AL773604.1-201ENST00000617417 272 ntBASIC14.69□□□□□ -0.06
SRP9P49458 TP73-AS1-207ENST00000624167 988 ntBASIC14.69□□□□□ -0.06
SRP9P49458 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SRP9P49458 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SRP9P49458 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SRP9P49458 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
SRP9P49458 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SRP9P49458 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.68□□□□□ -0.06
SRP9P49458 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 LINC00982-205ENST00000420957 435 ntBASIC14.68□□□□□ -0.06
SRP9P49458 AC093909.1-201ENST00000504731 1122 ntBASIC14.68□□□□□ -0.06
SRP9P49458 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.68□□□□□ -0.06
SRP9P49458 AC104692.2-201ENST00000603054 253 ntBASIC14.68□□□□□ -0.06
SRP9P49458 AC025062.2-201ENST00000605477 670 ntBASIC14.68□□□□□ -0.06
SRP9P49458 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.68□□□□□ -0.06
SRP9P49458 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms