Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.16■□□□□ 0.34
MMP13P45452 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 PMS2P1-201ENST00000431037 1228 ntBASIC17.16■□□□□ 0.34
MMP13P45452 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.16■□□□□ 0.34
MMP13P45452 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.16■□□□□ 0.34
MMP13P45452 AC106730.1-201ENST00000566722 1090 ntBASIC17.16■□□□□ 0.34
MMP13P45452 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 AC013467.2-201ENST00000605472 835 ntBASIC17.16■□□□□ 0.34
MMP13P45452 AC006277.1-201ENST00000624348 1610 ntBASIC17.16■□□□□ 0.34
MMP13P45452 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 SLC22A20-204ENST00000530038 1673 ntBASIC17.16■□□□□ 0.34
MMP13P45452 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 AC131009.4-201ENST00000624048 1740 ntBASIC17.16■□□□□ 0.34
MMP13P45452 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 AL596087.1-201ENST00000400979 1969 ntBASIC17.15■□□□□ 0.34
MMP13P45452 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 AC007967.2-201ENST00000432613 625 ntBASIC17.15■□□□□ 0.34
MMP13P45452 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP13P45452 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 AC064836.3-201ENST00000607928 673 ntBASIC17.15■□□□□ 0.34
MMP13P45452 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP13P45452 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MMP13P45452 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP13P45452 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP13P45452 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
MMP13P45452 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MMP13P45452 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
MMP13P45452 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
MMP13P45452 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.14■□□□□ 0.33
MMP13P45452 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP13P45452 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP13P45452 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP13P45452 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP13P45452 MIR4492-201ENST00000581627 80 ntBASIC17.14■□□□□ 0.33
MMP13P45452 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP13P45452 AC010507.1-201ENST00000633895 436 ntBASIC17.14■□□□□ 0.33
MMP13P45452 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP13P45452 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP13P45452 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MMP13P45452 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP13P45452 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP13P45452 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP13P45452 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms