Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
APOBEC1P41238 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 HTR5BP-201ENST00000430851 1154 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.88□□□□□ -0.03
APOBEC1P41238 PRYP6-201ENST00000514804 343 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.88□□□□□ -0.03
APOBEC1P41238 AC005829.1-201ENST00000570002 483 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 MIR3687-2-201ENST00000577708 61 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.88□□□□□ -0.03
APOBEC1P41238 MIR3687-1-201ENST00000614492 61 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBEC1P41238 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBEC1P41238 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBEC1P41238 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.88□□□□□ -0.03
APOBEC1P41238 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 AC073439.1-201ENST00000624121 1774 ntBASIC14.88□□□□□ -0.03
APOBEC1P41238 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
APOBEC1P41238 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.88□□□□□ -0.03
APOBEC1P41238 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOBEC1P41238 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 AC046158.3-201ENST00000624947 2558 ntBASIC14.87□□□□□ -0.03
APOBEC1P41238 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.87□□□□□ -0.03
APOBEC1P41238 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AL135744.1-201ENST00000565098 629 ntBASIC14.87□□□□□ -0.03
APOBEC1P41238 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.87□□□□□ -0.03
APOBEC1P41238 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.87□□□□□ -0.03
APOBEC1P41238 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 AC006449.6-201ENST00000612330 2296 ntBASIC14.87□□□□□ -0.03
APOBEC1P41238 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.87□□□□□ -0.03
APOBEC1P41238 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOBEC1P41238 AL592424.1-201ENST00000563624 1536 ntBASIC14.87□□□□□ -0.03
APOBEC1P41238 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 REXO1L8P-201ENST00000604378 1897 ntBASIC14.86□□□□□ -0.03
APOBEC1P41238 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBEC1P41238 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
APOBEC1P41238 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.86□□□□□ -0.03
APOBEC1P41238 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms