Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXA13P31271 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXA13P31271 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 AL353705.2-201ENST00000428243 662 ntBASIC18.68■□□□□ 0.58
HOXA13P31271 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXA13P31271 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.68■□□□□ 0.58
HOXA13P31271 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 AC092364.2-202ENST00000597012 1073 ntBASIC18.68■□□□□ 0.58
HOXA13P31271 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.68■□□□□ 0.58
HOXA13P31271 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA13P31271 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA13P31271 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA13P31271 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA13P31271 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HOXA13P31271 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA13P31271 BASP1P1-201ENST00000430708 665 ntBASIC18.67■□□□□ 0.58
HOXA13P31271 MTND6P24-201ENST00000440466 518 ntBASIC18.67■□□□□ 0.58
HOXA13P31271 UGT1A2P-201ENST00000454886 866 ntBASIC18.67■□□□□ 0.58
HOXA13P31271 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 INGX-202ENST00000489074 768 ntBASIC18.67■□□□□ 0.58
HOXA13P31271 AC027369.6-201ENST00000525520 931 ntBASIC18.67■□□□□ 0.58
HOXA13P31271 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXA13P31271 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXA13P31271 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA13P31271 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXA13P31271 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA13P31271 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 OR6D1P-203ENST00000641209 4860 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXA13P31271 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA13P31271 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA13P31271 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA13P31271 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA13P31271 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA13P31271 RNA5SP421-201ENST00000516864 134 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 AC105021.1-202ENST00000570572 669 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA13P31271 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA13P31271 AC061975.2-201ENST00000581722 295 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 AL138828.2-201ENST00000615812 383 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 AC073592.8-201ENST00000624126 511 ntBASIC18.66■□□□□ 0.58
HOXA13P31271 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HOXA13P31271 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA13P31271 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXA13P31271 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA13P31271 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA13P31271 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA13P31271 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA13P31271 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms