Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.77■□□□□ 0.27
NFKB1P19838 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NFKB1P19838 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NFKB1P19838 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.77■□□□□ 0.27
NFKB1P19838 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NFKB1P19838 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NFKB1P19838 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
NFKB1P19838 AC008741.2-201ENST00000612792 3115 ntBASIC16.76■□□□□ 0.27
NFKB1P19838 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NFKB1P19838 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NFKB1P19838 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NFKB1P19838 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.76■□□□□ 0.27
NFKB1P19838 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.76■□□□□ 0.27
NFKB1P19838 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.76■□□□□ 0.27
NFKB1P19838 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
NFKB1P19838 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NFKB1P19838 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NFKB1P19838 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NFKB1P19838 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
NFKB1P19838 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 AL022342.1-201ENST00000400363 863 ntBASIC16.75■□□□□ 0.27
NFKB1P19838 AC023274.1-201ENST00000418278 595 ntBASIC16.75■□□□□ 0.27
NFKB1P19838 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.75■□□□□ 0.27
NFKB1P19838 AP002472.1-201ENST00000577490 586 ntBASIC16.75■□□□□ 0.27
NFKB1P19838 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
NFKB1P19838 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NFKB1P19838 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NFKB1P19838 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms