Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
CCDC130P13994 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCDC130P13994 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC130P13994 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC130P13994 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC130P13994 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC130P13994 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC130P13994 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 LINC01144-201ENST00000626198 1710 ntBASIC17.42■□□□□ 0.38
CCDC130P13994 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC130P13994 RBPMS2P1-201ENST00000437762 623 ntBASIC17.42■□□□□ 0.38
CCDC130P13994 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC130P13994 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC130P13994 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC130P13994 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 LINC00628-201ENST00000628516 1289 ntBASIC17.42■□□□□ 0.38
CCDC130P13994 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC130P13994 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.42■□□□□ 0.38
CCDC130P13994 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC130P13994 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC130P13994 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 AC005622.1-201ENST00000636801 1703 ntBASIC17.41■□□□□ 0.38
CCDC130P13994 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 AL662844.4-201ENST00000606367 2838 ntBASIC17.41■□□□□ 0.38
CCDC130P13994 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC130P13994 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC130P13994 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC130P13994 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC130P13994 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC130P13994 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC130P13994 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC130P13994 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC130P13994 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC130P13994 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 AC011270.2-201ENST00000624293 2550 ntBASIC17.4■□□□□ 0.38
CCDC130P13994 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms