Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL11A2P13942 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 LETM1P2-201ENST00000597330 2178 ntBASIC19.73■□□□□ 0.75
COL11A2P13942 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 AC134915.1-201ENST00000426461 574 ntBASIC19.73■□□□□ 0.75
COL11A2P13942 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.73■□□□□ 0.75
COL11A2P13942 YBX1P6-201ENST00000442962 1002 ntBASIC19.73■□□□□ 0.75
COL11A2P13942 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL11A2P13942 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.73■□□□□ 0.75
COL11A2P13942 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.73■□□□□ 0.75
COL11A2P13942 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.73■□□□□ 0.75
COL11A2P13942 AL021578.1-201ENST00000613646 709 ntBASIC19.73■□□□□ 0.75
COL11A2P13942 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A2P13942 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL11A2P13942 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A2P13942 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A2P13942 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.72■□□□□ 0.75
COL11A2P13942 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 AC103810.3-201ENST00000583567 96 ntBASIC19.72■□□□□ 0.75
COL11A2P13942 AC107373.2-201ENST00000607735 490 ntBASIC19.72■□□□□ 0.75
COL11A2P13942 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.72■□□□□ 0.75
COL11A2P13942 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A2P13942 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A2P13942 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A2P13942 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
COL11A2P13942 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A2P13942 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A2P13942 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A2P13942 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 AC005695.3-201ENST00000614522 232 ntBASIC19.71■□□□□ 0.75
COL11A2P13942 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A2P13942 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 AC141586.5-201ENST00000624546 2050 ntBASIC19.71■□□□□ 0.75
COL11A2P13942 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.71■□□□□ 0.75
COL11A2P13942 BAATP1-201ENST00000412284 1225 ntBASIC19.71■□□□□ 0.75
COL11A2P13942 PFN1P12-201ENST00000455938 534 ntBASIC19.71■□□□□ 0.75
COL11A2P13942 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.71■□□□□ 0.75
COL11A2P13942 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A2P13942 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL11A2P13942 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COL11A2P13942 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.7■□□□□ 0.74
COL11A2P13942 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL11A2P13942 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 AC068880.1-201ENST00000507289 2297 ntBASIC19.7■□□□□ 0.74
COL11A2P13942 AL691432.1-201ENST00000596308 1422 ntBASIC19.7■□□□□ 0.74
COL11A2P13942 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 C1QBPP1-201ENST00000400117 770 ntBASIC19.7■□□□□ 0.74
COL11A2P13942 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms