Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 AL645728.1-201ENST00000366221 2101 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
DEFA4P12838 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.47□□□□□ -0.25
DEFA4P12838 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.47□□□□□ -0.25
DEFA4P12838 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 AC097376.2-205ENST00000610159 5334 ntBASIC13.47□□□□□ -0.25
DEFA4P12838 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
DEFA4P12838 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DEFA4P12838 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DEFA4P12838 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 AL391256.1-201ENST00000443260 1855 ntBASIC13.46□□□□□ -0.25
DEFA4P12838 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
DEFA4P12838 AL365203.3-201ENST00000609742 2057 ntBASIC13.46□□□□□ -0.25
DEFA4P12838 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
DEFA4P12838 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.46□□□□□ -0.25
DEFA4P12838 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DEFA4P12838 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
DEFA4P12838 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.46□□□□□ -0.25
DEFA4P12838 PRYP5-201ENST00000451909 266 ntBASIC13.46□□□□□ -0.25
DEFA4P12838 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.46□□□□□ -0.25
DEFA4P12838 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.46□□□□□ -0.25
DEFA4P12838 NKAPP1-205ENST00000585790 367 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms