Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.18■□□□□ 0.98
MS4A1P11836 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.18■□□□□ 0.98
MS4A1P11836 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
MS4A1P11836 RNA5SP415-201ENST00000517246 115 ntBASIC21.18■□□□□ 0.98
MS4A1P11836 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.18■□□□□ 0.98
MS4A1P11836 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A1P11836 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A1P11836 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
MS4A1P11836 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 AL603832.2-201ENST00000566195 2125 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MS4A1P11836 MYB-242ENST00000618728 3545 ntTSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MS4A1P11836 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MS4A1P11836 RNU1-129P-201ENST00000384064 167 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MS4A1P11836 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 HMGA1P7-201ENST00000406908 502 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MS4A1P11836 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 AL513480.1-201ENST00000451731 511 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.17■□□□□ 0.98
MS4A1P11836 AC079776.4-201ENST00000511039 504 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 U1.21-201ENST00000580816 167 ntBASIC21.17■□□□□ 0.98
MS4A1P11836 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.17■□□□□ 0.98
MS4A1P11836 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.17■□□□□ 0.98
MS4A1P11836 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
MS4A1P11836 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MS4A1P11836 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MS4A1P11836 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 AL596087.1-201ENST00000400979 1969 ntBASIC21.16■□□□□ 0.98
MS4A1P11836 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MS4A1P11836 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.16■□□□□ 0.98
MS4A1P11836 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MS4A1P11836 HCG4B-203ENST00000450128 991 ntBASIC21.16■□□□□ 0.98
MS4A1P11836 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MS4A1P11836 AC096734.2-201ENST00000562054 433 ntBASIC21.16■□□□□ 0.98
MS4A1P11836 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.16■□□□□ 0.98
MS4A1P11836 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.16■□□□□ 0.98
MS4A1P11836 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms