Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC6P09630 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC6P09630 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HOXC6P09630 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HOXC6P09630 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXC6P09630 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXC6P09630 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HOXC6P09630 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.44■□□□□ 0.54
HOXC6P09630 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXC6P09630 AC007389.4-201ENST00000454674 793 ntBASIC18.44■□□□□ 0.54
HOXC6P09630 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXC6P09630 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXC6P09630 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXC6P09630 AC074044.1-201ENST00000609673 707 ntBASIC18.44■□□□□ 0.54
HOXC6P09630 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 AP001094.4-201ENST00000579008 2176 ntBASIC18.44■□□□□ 0.54
HOXC6P09630 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXC6P09630 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
HOXC6P09630 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HOXC6P09630 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.43■□□□□ 0.54
HOXC6P09630 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
HOXC6P09630 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.43■□□□□ 0.54
HOXC6P09630 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.43■□□□□ 0.54
HOXC6P09630 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.43■□□□□ 0.54
HOXC6P09630 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.43■□□□□ 0.54
HOXC6P09630 MIR4259-201ENST00000584466 101 ntBASIC18.43■□□□□ 0.54
HOXC6P09630 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.43■□□□□ 0.54
HOXC6P09630 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.43■□□□□ 0.54
HOXC6P09630 WFDC1-204ENST00000613603 549 ntBASIC18.43■□□□□ 0.54
HOXC6P09630 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.43■□□□□ 0.54
HOXC6P09630 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HOXC6P09630 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HOXC6P09630 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HOXC6P09630 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXC6P09630 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXC6P09630 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC6P09630 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 TMEM14DP-201ENST00000422205 345 ntBASIC18.42■□□□□ 0.54
HOXC6P09630 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HOXC6P09630 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.42■□□□□ 0.54
HOXC6P09630 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC6P09630 AP005482.1-201ENST00000563722 1273 ntBASIC18.42■□□□□ 0.54
HOXC6P09630 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC6P09630 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC6P09630 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.42■□□□□ 0.54
HOXC6P09630 AC025048.3-201ENST00000590609 569 ntBASIC18.42■□□□□ 0.54
HOXC6P09630 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 AC005702.4-201ENST00000618393 416 ntBASIC18.42■□□□□ 0.54
HOXC6P09630 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC6P09630 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.42■□□□□ 0.54
HOXC6P09630 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HOXC6P09630 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.42■□□□□ 0.54
HOXC6P09630 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms