Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PCDHA1-201ENST00000378133 2726 ntBASIC16.27■□□□□ 0.2
CAPN1P07384 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPN1P07384 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CAPN1P07384 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CAPN1P07384 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CAPN1P07384 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 GGTLC5P-201ENST00000617623 998 ntBASIC16.27■□□□□ 0.2
CAPN1P07384 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CAPN1P07384 AC134684.3-201ENST00000641758 218 ntBASIC16.27■□□□□ 0.2
CAPN1P07384 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPN1P07384 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 SNX33P1-201ENST00000592116 1762 ntBASIC16.27■□□□□ 0.2
CAPN1P07384 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CAPN1P07384 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CAPN1P07384 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CAPN1P07384 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CAPN1P07384 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.27■□□□□ 0.19
CAPN1P07384 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.27■□□□□ 0.19
CAPN1P07384 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CAPN1P07384 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 AL671710.1-201ENST00000610245 2349 ntBASIC16.27■□□□□ 0.19
CAPN1P07384 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CAPN1P07384 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 AL513523.2-202ENST00000427283 2040 ntBASIC16.26■□□□□ 0.19
CAPN1P07384 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN1P07384 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN1P07384 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.26■□□□□ 0.19
CAPN1P07384 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 AC004967.1-201ENST00000453589 447 ntBASIC16.26■□□□□ 0.19
CAPN1P07384 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.26■□□□□ 0.19
CAPN1P07384 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.26■□□□□ 0.19
CAPN1P07384 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.26■□□□□ 0.19
CAPN1P07384 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 MPDU1-223ENST00000582151 728 ntBASIC16.26■□□□□ 0.19
CAPN1P07384 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.26■□□□□ 0.19
CAPN1P07384 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN1P07384 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN1P07384 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CAPN1P07384 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.26■□□□□ 0.19
CAPN1P07384 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CAPN1P07384 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN1P07384 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CAPN1P07384 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN1P07384 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.25■□□□□ 0.19
CAPN1P07384 YBX1P5-201ENST00000509441 847 ntBASIC16.25■□□□□ 0.19
CAPN1P07384 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms