Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 TREML5P-201ENST00000421694 576 ntBASIC16.41■□□□□ 0.22
CAPNS1P04632 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPNS1P04632 U91328.1-201ENST00000437528 223 ntBASIC16.41■□□□□ 0.22
CAPNS1P04632 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPNS1P04632 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 FAM86C2P-203ENST00000528684 1004 ntBASIC16.41■□□□□ 0.22
CAPNS1P04632 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CAPNS1P04632 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPNS1P04632 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPNS1P04632 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPNS1P04632 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPNS1P04632 AL671277.1-201ENST00000429656 993 ntBASIC16.4■□□□□ 0.22
CAPNS1P04632 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPNS1P04632 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPNS1P04632 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CAPNS1P04632 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CAPNS1P04632 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CAPNS1P04632 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPNS1P04632 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CAPNS1P04632 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CAPNS1P04632 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPNS1P04632 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CAPNS1P04632 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CAPNS1P04632 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 AC002056.1-201ENST00000395613 760 ntBASIC16.39■□□□□ 0.21
CAPNS1P04632 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 AL592309.1-201ENST00000443127 649 ntBASIC16.39■□□□□ 0.21
CAPNS1P04632 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.39■□□□□ 0.21
CAPNS1P04632 AC079140.1-201ENST00000508039 487 ntBASIC16.39■□□□□ 0.21
CAPNS1P04632 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.39■□□□□ 0.21
CAPNS1P04632 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPNS1P04632 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPNS1P04632 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPNS1P04632 AC243562.1-201ENST00000560672 389 ntBASIC16.39■□□□□ 0.21
CAPNS1P04632 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPNS1P04632 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPNS1P04632 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPNS1P04632 AL158211.3-201ENST00000607385 239 ntBASIC16.39■□□□□ 0.21
CAPNS1P04632 AL390754.1-201ENST00000619088 582 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms