Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV12-3P01733 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRBV12-3P01733 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC211486.1-202ENST00000416371 468 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 ACTG1P14-201ENST00000446382 1122 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 SPDYE11-202ENST00000450699 704 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC211476.1-201ENST00000503899 468 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC243562.1-201ENST00000560672 389 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SPDYE9P-201ENST00000570642 692 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC026120.1-201ENST00000611536 926 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 SPDYE10P-202ENST00000612005 668 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 SPDYE8P-202ENST00000612377 668 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC134684.3-201ENST00000641758 218 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 AC073439.1-201ENST00000624121 1774 ntBASIC12.73□□□□□ -0.37
TRBV12-3P01733 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV12-3P01733 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV12-3P01733 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AKAP8P1-201ENST00000434743 1349 ntBASIC12.72□□□□□ -0.37
TRBV12-3P01733 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 RPS8P6-201ENST00000426177 609 ntBASIC12.72□□□□□ -0.37
TRBV12-3P01733 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AC079140.1-201ENST00000508039 487 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms