Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 AC116353.5-201ENST00000638148 1699 ntBASIC16.34■□□□□ 0.21
PDGFBP01127 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 AL136982.4-201ENST00000437689 1740 ntBASIC16.34■□□□□ 0.21
PDGFBP01127 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDGFBP01127 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFBP01127 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFBP01127 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 BRI3BPP1-201ENST00000594224 787 ntBASIC16.34■□□□□ 0.21
PDGFBP01127 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFBP01127 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.34■□□□□ 0.21
PDGFBP01127 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.34■□□□□ 0.21
PDGFBP01127 AC013467.2-201ENST00000605472 835 ntBASIC16.34■□□□□ 0.21
PDGFBP01127 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFBP01127 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDGFBP01127 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFBP01127 AL607033.1-201ENST00000623900 1599 ntBASIC16.34■□□□□ 0.21
PDGFBP01127 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.33■□□□□ 0.21
PDGFBP01127 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFBP01127 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.33■□□□□ 0.21
PDGFBP01127 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.33■□□□□ 0.21
PDGFBP01127 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PDGFBP01127 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
PDGFBP01127 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PDGFBP01127 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFBP01127 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDGFBP01127 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PDGFBP01127 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 HINT2P1-201ENST00000419438 481 ntBASIC16.33■□□□□ 0.2
PDGFBP01127 AC016694.1-201ENST00000434179 700 ntBASIC16.33■□□□□ 0.2
PDGFBP01127 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PDGFBP01127 FAM86LP-201ENST00000478302 853 ntBASIC16.33■□□□□ 0.2
PDGFBP01127 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFBP01127 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.33■□□□□ 0.2
PDGFBP01127 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.33■□□□□ 0.2
PDGFBP01127 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 DUX4L45-201ENST00000566406 1057 ntBASIC16.33■□□□□ 0.2
PDGFBP01127 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFBP01127 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.33■□□□□ 0.2
PDGFBP01127 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFBP01127 AC016396.2-201ENST00000562575 1417 ntBASIC16.33■□□□□ 0.2
PDGFBP01127 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFBP01127 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFBP01127 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PDGFBP01127 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 EIF4HP1-201ENST00000453115 687 ntBASIC16.32■□□□□ 0.2
PDGFBP01127 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFBP01127 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.32■□□□□ 0.2
PDGFBP01127 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDGFBP01127 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.32■□□□□ 0.2
PDGFBP01127 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms