Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TIMP1P01033 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TIMP1P01033 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.55■□□□□ 0.4
TIMP1P01033 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.55■□□□□ 0.4
TIMP1P01033 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TIMP1P01033 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.55■□□□□ 0.4
TIMP1P01033 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMP1P01033 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 GGT4P-201ENST00000623672 1708 ntBASIC17.55■□□□□ 0.4
TIMP1P01033 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TIMP1P01033 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMP1P01033 U82695.1-201ENST00000635752 1889 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMP1P01033 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TIMP1P01033 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 ELK2AP-201ENST00000392510 1007 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 AC134915.1-201ENST00000426461 574 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TIMP1P01033 FTH1P14-201ENST00000482930 551 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 ZNF767P-206ENST00000513792 565 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.54■□□□□ 0.4
TIMP1P01033 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMP1P01033 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMP1P01033 AL645728.1-201ENST00000366221 2101 ntBASIC17.54■□□□□ 0.4
TIMP1P01033 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TIMP1P01033 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
TIMP1P01033 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TIMP1P01033 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMP1P01033 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 SOCS2P1-201ENST00000417727 557 ntBASIC17.53■□□□□ 0.4
TIMP1P01033 AC016694.1-201ENST00000434179 700 ntBASIC17.53■□□□□ 0.4
TIMP1P01033 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 RPL13AP20-201ENST00000459725 609 ntBASIC17.53■□□□□ 0.4
TIMP1P01033 KRT8P13-201ENST00000463294 1010 ntBASIC17.53■□□□□ 0.4
TIMP1P01033 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.53■□□□□ 0.4
TIMP1P01033 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.53■□□□□ 0.4
TIMP1P01033 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.53■□□□□ 0.4
TIMP1P01033 AC124283.3-201ENST00000570869 594 ntBASIC17.53■□□□□ 0.4
TIMP1P01033 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.53■□□□□ 0.4
TIMP1P01033 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TIMP1P01033 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms