Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.43■□□□□ 0.38
ZBED1O96006 SPDYE9P-201ENST00000570642 692 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.43■□□□□ 0.38
ZBED1O96006 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 SPDYE10P-202ENST00000612005 668 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 SPDYE8P-202ENST00000612377 668 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 AL513210.1-201ENST00000629608 234 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
ZBED1O96006 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.42■□□□□ 0.38
ZBED1O96006 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.42■□□□□ 0.38
ZBED1O96006 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 DNAJB3-202ENST00000449667 1266 ntBASIC17.42■□□□□ 0.38
ZBED1O96006 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 KRT18P34-201ENST00000488218 1270 ntBASIC17.42■□□□□ 0.38
ZBED1O96006 AP000344.2-201ENST00000512987 629 ntBASIC17.42■□□□□ 0.38
ZBED1O96006 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 AC243562.1-201ENST00000560672 389 ntBASIC17.42■□□□□ 0.38
ZBED1O96006 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 AC022145.2-201ENST00000598203 171 ntBASIC17.42■□□□□ 0.38
ZBED1O96006 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.42■□□□□ 0.38
ZBED1O96006 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.42■□□□□ 0.38
ZBED1O96006 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.42■□□□□ 0.38
ZBED1O96006 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ZBED1O96006 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
ZBED1O96006 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZBED1O96006 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
ZBED1O96006 AC079140.1-201ENST00000508039 487 ntBASIC17.41■□□□□ 0.38
ZBED1O96006 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 SNHG9-202ENST00000564014 471 ntBASIC17.41■□□□□ 0.38
ZBED1O96006 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 AL596442.2-201ENST00000610240 980 ntBASIC17.41■□□□□ 0.38
ZBED1O96006 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZBED1O96006 GGT4P-201ENST00000623672 1708 ntBASIC17.41■□□□□ 0.38
ZBED1O96006 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZBED1O96006 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZBED1O96006 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
ZBED1O96006 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms