Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCA1O95477 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ABCA1O95477 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ABCA1O95477 MIR1909-201ENST00000411312 80 ntBASIC13.84□□□□□ -0.19
ABCA1O95477 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ABCA1O95477 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.84□□□□□ -0.19
ABCA1O95477 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCA1O95477 SPTLC1P1-201ENST00000447199 261 ntBASIC13.84□□□□□ -0.19
ABCA1O95477 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCA1O95477 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCA1O95477 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.84□□□□□ -0.19
ABCA1O95477 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.84□□□□□ -0.19
ABCA1O95477 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ABCA1O95477 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ABCA1O95477 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
ABCA1O95477 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ABCA1O95477 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
ABCA1O95477 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.83□□□□□ -0.19
ABCA1O95477 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
ABCA1O95477 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ABCA1O95477 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
ABCA1O95477 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ABCA1O95477 HCG4-201ENST00000418983 998 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 ARSEP1-201ENST00000420443 635 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ABCA1O95477 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.83□□□□□ -0.2
ABCA1O95477 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCA1O95477 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCA1O95477 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 AL138918.1-201ENST00000568306 659 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 TP53TG3HP-202ENST00000569755 579 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 AL139327.4-201ENST00000612362 153 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.83□□□□□ -0.2
ABCA1O95477 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 AL353732.1-201ENST00000569618 1459 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 ATP5G2P4-201ENST00000442175 420 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCA1O95477 AC027369.6-201ENST00000525520 931 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 AC132938.2-201ENST00000579188 680 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 AL591163.1-201ENST00000641757 987 ntBASIC13.83□□□□□ -0.2
ABCA1O95477 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ABCA1O95477 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.83□□□□□ -0.2
ABCA1O95477 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 AL138688.1-201ENST00000624851 1594 ntBASIC13.82□□□□□ -0.2
ABCA1O95477 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ABCA1O95477 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.82□□□□□ -0.2
ABCA1O95477 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.82□□□□□ -0.2
ABCA1O95477 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.82□□□□□ -0.2
ABCA1O95477 AL031055.1-201ENST00000606362 631 ntBASIC13.82□□□□□ -0.2
ABCA1O95477 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.82□□□□□ -0.2
ABCA1O95477 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.82□□□□□ -0.2
ABCA1O95477 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ABCA1O95477 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ABCA1O95477 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms