Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 AC005840.4-201ENST00000541242 2494 ntBASIC13.84□□□□□ -0.19
SIX6O95475 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SIX6O95475 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.84□□□□□ -0.19
SIX6O95475 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SIX6O95475 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.84□□□□□ -0.19
SIX6O95475 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIX6O95475 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SIX6O95475 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.83□□□□□ -0.19
SIX6O95475 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIX6O95475 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIX6O95475 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIX6O95475 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
SIX6O95475 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 RPS2P55-201ENST00000397318 883 ntBASIC13.83□□□□□ -0.2
SIX6O95475 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 STK19B-204ENST00000512515 211 ntBASIC13.83□□□□□ -0.2
SIX6O95475 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.83□□□□□ -0.2
SIX6O95475 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 FAM197Y4-202ENST00000622692 608 ntBASIC13.83□□□□□ -0.2
SIX6O95475 AC073912.3-201ENST00000624414 853 ntBASIC13.83□□□□□ -0.2
SIX6O95475 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 LINC00528-201ENST00000600723 2160 ntBASIC13.83□□□□□ -0.2
SIX6O95475 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
SIX6O95475 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 AC009336.1-201ENST00000608941 1553 ntBASIC13.83□□□□□ -0.2
SIX6O95475 CICP23-201ENST00000605013 2741 ntBASIC13.83□□□□□ -0.2
SIX6O95475 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SIX6O95475 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIX6O95475 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 AC020658.6-201ENST00000623564 1870 ntBASIC13.82□□□□□ -0.2
SIX6O95475 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SIX6O95475 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 AL137784.3-201ENST00000623858 2288 ntBASIC13.82□□□□□ -0.2
SIX6O95475 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 AL390955.1-201ENST00000428694 934 ntBASIC13.82□□□□□ -0.2
SIX6O95475 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.82□□□□□ -0.2
SIX6O95475 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SIX6O95475 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.82□□□□□ -0.2
SIX6O95475 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.82□□□□□ -0.2
SIX6O95475 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 NEK4P2-201ENST00000580004 1012 ntBASIC13.82□□□□□ -0.2
SIX6O95475 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.82□□□□□ -0.2
SIX6O95475 AL139011.1-202ENST00000642063 584 ntBASIC13.82□□□□□ -0.2
SIX6O95475 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SIX6O95475 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms