Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 AL353807.1-201ENST00000427475 662 ntBASIC14.33□□□□□ -0.12
CCNKO75909 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 AF186192.3-201ENST00000583427 947 ntBASIC14.33□□□□□ -0.12
CCNKO75909 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 AC073195.1-201ENST00000607241 877 ntBASIC14.33□□□□□ -0.12
CCNKO75909 REXO1L2P-201ENST00000425429 2069 ntBASIC14.33□□□□□ -0.12
CCNKO75909 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCNKO75909 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCNKO75909 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
CCNKO75909 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CCNKO75909 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCNKO75909 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 SLC25A1P4-201ENST00000567977 778 ntBASIC14.32□□□□□ -0.12
CCNKO75909 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 TUBB8P12-201ENST00000308911 1335 ntBASIC14.32□□□□□ -0.12
CCNKO75909 TUBB7P-202ENST00000428444 1305 ntBASIC14.32□□□□□ -0.12
CCNKO75909 TUBB8P7-204ENST00000567960 1332 ntBASIC14.32□□□□□ -0.12
CCNKO75909 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
CCNKO75909 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNKO75909 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNKO75909 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNKO75909 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 KRT8P7-201ENST00000533003 1432 ntBASIC14.32□□□□□ -0.12
CCNKO75909 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCNKO75909 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNKO75909 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCNKO75909 ESRRAP1-201ENST00000400596 1257 ntBASIC14.31□□□□□ -0.12
CCNKO75909 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNKO75909 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCNKO75909 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNKO75909 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCNKO75909 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms