Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFS3O75489 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 AC018695.7-201ENST00000624587 2492 ntBASIC16.44■□□□□ 0.22
NDUFS3O75489 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NDUFS3O75489 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 RNA5SP416-201ENST00000516838 111 ntBASIC16.44■□□□□ 0.22
NDUFS3O75489 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 SLC25A1P1-201ENST00000528351 927 ntBASIC16.44■□□□□ 0.22
NDUFS3O75489 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFS3O75489 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.44■□□□□ 0.22
NDUFS3O75489 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFS3O75489 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NDUFS3O75489 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS3O75489 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS3O75489 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS3O75489 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 MTHFR-217ENST00000641820 1569 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.43■□□□□ 0.22
NDUFS3O75489 AL591424.1-201ENST00000442569 1213 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.43■□□□□ 0.22
NDUFS3O75489 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.43■□□□□ 0.22
NDUFS3O75489 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.43■□□□□ 0.22
NDUFS3O75489 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 KRT19P2-202ENST00000557173 1012 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 AC106730.1-201ENST00000566722 1090 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.43■□□□□ 0.22
NDUFS3O75489 AL009183.1-201ENST00000603760 355 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 AC027601.4-201ENST00000611259 610 ntBASIC16.43■□□□□ 0.22
NDUFS3O75489 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NDUFS3O75489 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS3O75489 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
NDUFS3O75489 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NDUFS3O75489 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms