Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.12■□□□□ 0.33
LRCH4O75427 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.12■□□□□ 0.33
LRCH4O75427 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRCH4O75427 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LRCH4O75427 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.12■□□□□ 0.33
LRCH4O75427 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.11■□□□□ 0.33
LRCH4O75427 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 AC002056.1-201ENST00000395613 760 ntBASIC17.11■□□□□ 0.33
LRCH4O75427 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.11■□□□□ 0.33
LRCH4O75427 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.11■□□□□ 0.33
LRCH4O75427 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.11■□□□□ 0.33
LRCH4O75427 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRCH4O75427 AL161645.1-201ENST00000622716 1255 ntBASIC17.11■□□□□ 0.33
LRCH4O75427 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.11■□□□□ 0.33
LRCH4O75427 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
LRCH4O75427 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH4O75427 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LRCH4O75427 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.1■□□□□ 0.33
LRCH4O75427 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.1■□□□□ 0.33
LRCH4O75427 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 AC023274.1-201ENST00000418278 595 ntBASIC17.1■□□□□ 0.33
LRCH4O75427 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 AC112191.1-201ENST00000523689 701 ntBASIC17.1■□□□□ 0.33
LRCH4O75427 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRCH4O75427 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.1■□□□□ 0.33
LRCH4O75427 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.1■□□□□ 0.33
LRCH4O75427 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRCH4O75427 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH4O75427 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms